Technical Help - Useful Information


Useful Information

Nucleic Acid Information

Molecular Weight Conversions

Estimating Tm of an Oligonucleotide

Tm = [4°C x # of Cs and Gs in the oligo] + [2°Cx # of As and Ts in the oligo]

Estimating Molar Amounts of Primer

To estimate the weight of 1picomole of oligodeoxynucleotide, multiply the number of nucleotides by 0.33ng.
For example, one picomole of a 24-mer is 7.92ng (24 x 0.33 ng = 7.92ng).

Estimating Molar Amounts of Template

To estimate the weight of 100fmoles of double-stranded DNA template, multiply the number of kilobases by 66ng. For example, 100fmoles of a 2.7kb plasmid is 178ng (2.7 x 66ng = 178ng).

Metric Prefixes
FactorPrefixSymbol
109gigaG
106megaM
103kilok
10-3millim
10-6microµ
10-9nanon
10-12picop
10-15femtof
10-18attoa
10-21zeptoz

Approximate Amount of Template (in nanograms) Required for DNA Sequencing Reactions

Metric Prefixes
Template
Required
(fmoles)
Template Size (insert + vector) in kilobases
1 kb3 kb5 kb7 kb9 kb
25175083120150
5033100165230300
7550150250350450
10066200330460600
150100300500700900
2001354006609301200
25016550083012001550
300200600100014001800

Protein Yield Information

Bacterial Cells: Escherichia coli or Salmonella typhimurium

Cell dataPer cellPer litre at 109 cells per ml
Wet Weight9.5 x 10–13g 0.95g
Dry Weight2.8 x 10–13g 0.28g
Total Protein1.55 x 10–13g 0.15g
Volume1.15µm3=1 femtolitre
Protein conc. in the cell: 135mg/ml

Theoretical maximum yield for a protein of interest from 1 litre of culture (109 cells/ml):

0.1% of total protein: 150µg/litre

2.0% of total protein: 3mg/litre

50.0% of total protein: 75mg/litre

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